PPDB

 The Plant Proteome Database

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AT3G56310.1   Melibiase family protein
Lab Annot. alpha-galactosidase/hydrolase, melibiase
Mapman: 3.8.2 minor CHO metabolism.galactose.alpha-galactosidases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G56310.2 11Arabidopsis thaliana0437949488 (56)S
AT5G08370.1 11Arabidopsis thaliana6E-17537063744 (4)S
AT5G08370.2 11Arabidopsis thaliana9E-17537063744 (4)_
Os07g48160.1 7Oryza sativa038974840 (0)S
Os10g35110.1 7Oryza sativa1E-17136663749 (9)S
Os10g35110.2 7Oryza sativa1E-17136663749 (9)S
GRMZM2G053554_P01 3.21Zea mays038873847 (7)S
Zm00001eb330650_P001 agpv5Zea mays038873840 (0)S
v1_GRMZM2G053554_P01 4a53Zea mays038873848 (8)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Melibiase(1) Melibiase_2(1) Melibiase_2_C(1) Melibiase_C(1)
TargetP: Secreted (Class 1 C0.004; M0.022; S0.977; _0.026)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 437 aa (-cTP 341)
Molecular Weight 48.36 kDA(-cTP )
PI 4.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
355Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
356Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1334Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1414Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR2 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2251Detail       seedlings [A. thaliana] total tissue wild-type
2296Detail        [A. thaliana] Clp C1 WT
2398Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/35SRecA-GFP
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 15215502(Vacuolar proteome)
15539469(vacuole)
18998720(SA-induced secreted proteome (cell culture))
19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
19888209(80S polysomal fraction)
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)
21413152(Xylem-sap (BrassicaOleracea))

Comparative Proteomics Data

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