PPDB

 The Plant Proteome Database

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AT3G56060.1   Glucose-methanol-choline (GMC) oxidoreductase family protein
Lab Annot. glucose-methanol-choline (GMC) oxidoreductase protein
Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G51950.1 11Arabidopsis thaliana058770830 (0)S
AT5G51950.3 11Arabidopsis thaliana058570830 (0)S
AT5G51950.2 11Arabidopsis thaliana055272840 (0)S
Os04g48400.1 7Oryza sativa058252690 (0)S
Os02g45530.1 7Oryza sativa058750670 (0)S
Os10g38050.1 7Oryza sativa055152680 (0)S
v1_GRMZM2G434500_P02 4a53Zea mays054953690 (0)S
v1_GRMZM2G434500_P01 4a53Zea mays054953690 (0)S
GRMZM2G434500_P01 3.21Zea mays054953690 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DAO(1) FAD_binding_2(3) FAD_binding_3(1) GMC_oxred_C(1) GMC_oxred_N(1) HI0933_li
TargetP: Secreted (Class 1 C0.005; M0.021; S0.986; _0.074)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 577 aa (-cTP 517)
Molecular Weight 63.36 kDA(-cTP )
PI 6.25(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1619Detail        [A. thaliana] m48
1621Detail        [A. thaliana] m48
1833Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to leaves)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data

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