PPDB

PPDB	The Plant Proteome Database

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AT3G55980.1 salt-inducible zinc finger 1

Lab Annot.

salt-inducible zinc finger 1
Mapman: 27.3.12 RNA.regulation of transcription.C3H zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G55980.2 11 Arabidopsis thaliana 0 580 100 100 0 (0) C
AT2G40140.1 11 Arabidopsis thaliana 0 615 68 79 0 (0) _
AT2G40140.2 11 Arabidopsis thaliana 0 615 68 79 0 (0) _
Os05g03760.1 7 Oryza sativa 4E-121 625 40 52 0 (0) _
Os03g49170.3 7 Oryza sativa 1E-101 417 48 59 0 (0) _
Os03g49170.1 7 Oryza sativa 1E-101 417 48 59 0 (0) _
v1_GRMZM2G180979_P01 4a53 Zea mays 2E-117 678 37 49 1 (1) _
GRMZM2G180979_P01 3.21 Zea mays 2E-117 678 37 49 0 (0) _
Zm00001eb053870_P001 agpv5 Zea mays 2E-117 678 37 49 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ank(2) Ank_2(1) Ank_3(2) Ank_4(2) Torus(1) zf-CCCH(2) zf-CCCH_2(3) zf-CCCH_4(1)
TargetP:	Cytoplasm (Class 4 C0.255; M0.124; S0.153; _0.641)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	580 aa (-cTP 559)
Molecular Weight	64.06 kDA(-cTP )
PI	7.47(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data