PPDB

The Plant Proteome Database

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AT3G55920.1   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Lab Annot. peptidyl-prolyl cis-trans isomerase, putative / cyclophilin (CYP21-2)
Mapman: 31.3.1 cell.cycle.peptidylprolyl isomerase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G29960.3 11Arabidopsis thaliana2E-9918076860 (0)S
AT2G29960.1 11Arabidopsis thaliana2E-99180768636 (30)S
AT5G58710.1 11Arabidopsis thaliana2E-96177738796 (42)S
Os06g49480.2 7Oryza sativa3E-102216677735 (35)M
Os06g49480.1 7Oryza sativa3E-102216687835 (35)M
Os06g49470.1 7Oryza sativa2E-8422656680 (0)S
Zm00001eb227460_P003 agpv5Zea mays4E-9818274860 (0)M
v1_GRMZM2G084521_P03 4a53Zea mays4E-98182748647 (45)M
GRMZM2G084521_P03 3.21Zea mays4E-98182748646 (46)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pro_isomerase(1)
TargetP: Secreted (Class 1 C0.001; M0.084; S0.984; _0.043)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 228 aa (-cTP 224)
Molecular Weight 24.51 kDA(-cTP )
PI 6.52(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)
17644812(plasma membrane - suspension cells)
21173025(root proteome)
22430844(Golgi-cell-culture)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help