PPDB

The Plant Proteome Database

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AT3G55770.1   GATA type zinc finger transcription factor family protein

Lab Annot. LIM protein
Mapman: 27.3.50 RNA.regulation of transcription.General Transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G55770.3 11Arabidopsis thaliana8E-1461991001002 (0)_
AT3G55770.2 11Arabidopsis thaliana8E-1461991001002 (0)_
AT3G55770.5 11Arabidopsis thaliana8E-1461991001002 (0)_
Os03g15940.1 7Oryza sativa5E-10218078870 (0)_
Os02g42820.1 7Oryza sativa4E-8919265810 (0)_
Os04g45010.1 7Oryza sativa1E-8417566810 (0)_
Zm00001eb011840_P002 agpv5Zea mays1E-9718674850 (0)_
Zm00001eb011840_P001 agpv5Zea mays1E-9718674850 (0)_
GRMZM2G128206_P03 3.21Zea mays1E-9718674850 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DiS_P_DiS(2) LIM(2) Rieske(2) zf-ACC(3)
TargetP: Cytoplasm (Class 2 C0.013; M0.184; S0.043; _0.868)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 199 aa (-cTP 150)
Molecular Weight 21.66 kDA(-cTP )
PI 9.17(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(contaminants cell cycle interactome (cell culture))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help