PPDB

 The Plant Proteome Database

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AT3G55760.1   hypothetical protein
Lab Annot. LIKE EARLY STARVATION 1 (LESV)
Mapman: 2.2.2 major CHO metabolism.degradation.starch
Curated Location plastid stroma (Pubmed: 23198870 18431481 27207856 ) (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G55760.2 11Arabidopsis thaliana0578100100134 (70)C
AT3G55760.3 11Arabidopsis thaliana0578100100121 (57)C
AT1G42430.2 11Arabidopsis thaliana3E-6035338560 (0)_
Os11g37560.2 7Oryza sativa057452650 (0)M
Os11g37560.1 7Oryza sativa058252640 (0)M
Os03g04100.1 7Oryza sativa3E-6130142610 (0)M
Zm00001eb200610_P001 agpv5Zea mays054853670 (0)C
v1_GRMZM2G069092_P01 4a53Zea mays054853673 (3)C
GRMZM2G069092_P01 3.21Zea mays0548536710 (10)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: D-ser_dehydrat(1)
TargetP: Chloroplast (Class 4 C0.726; M0.459; S0.010; _0.032)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 578 aa (-cTP 522)
Molecular Weight 65.57 kDA(-cTP 59.46)
PI 5.32(-cTP 5.04)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
102Detail       petal [B. oleracea] plastid stromaAlboglabra
151Detail       leaf [A. thaliana] chloroplast stromawild-type
303Detail       leaf [A. thaliana] chloroplast stromawild-type
326Detail       leaf [A. thaliana] chloroplast stromawild-type
339Detail       leaf [A. thaliana] chloroplast stromawild-type
640Detail       leaf [A. thaliana] plastid nucleoid wild-type
869Detail       leaf [A. thaliana] chloroplast stromawild-type
870Detail       leaf [A. thaliana] chloroplast stromawild-type
871Detail       leaf [A. thaliana] chloroplast stromawild-type
873Detail       leaf [A. thaliana] chloroplast stromawild-type
874Detail       leaf [A. thaliana] chloroplast stromawild-type
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1455Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1456Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
1457Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1483Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1517Detail       leaf [A. thaliana] wild-type
1518Detail       leaf [A. thaliana] wild-type
1520Detail       leaf [A. thaliana] wild-type
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1933Detail       leaf [A. thaliana] chloroplast wild-type
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1943Detail       leaf [A. thaliana] stroma WT stromawild-type
1944Detail       leaf [A. thaliana] stroma UVR stromaUVR
1949Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1984Detail       leaf [A. thaliana] plastid wild-type
1999Detail       leaf [A. thaliana] stroma ClpS stromaclpS1
2000Detail       leaf [A. thaliana] stroma ClpS stromaclpS1
2001Detail       leaf [A. thaliana] stroma ClpS stromaclpS1
2112Detail       leaf [A. thaliana] Stroma stromawt
2113Detail       leaf [A. thaliana] Stroma stromawt
2114Detail       leaf [A. thaliana] Stroma stromawt
2115Detail       leaf [A. thaliana] Stroma stromacGep
2116Detail       leaf [A. thaliana] Stroma stromacGep
2132Detail       leaf [A. thaliana] chloroplast fractionation MSH1
2191Detail        [A. thaliana] plastid stroma stromaP3-trap-strepII 40
2286Detail        [A. thaliana] Clp C1 WT
2296Detail        [A. thaliana] Clp C1 WT
2311Detail       leaf [A. thaliana] PG plastoglobule 
2312Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2313Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2314Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2315Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2316Detail       leaf [A. thaliana] PG plastoglobule 
2317Detail       leaf [A. thaliana] PG plastoglobule 
2318Detail       leaf [A. thaliana] PG plastoglobule 
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 15028209(Total chloroplast)
16207701(chloroplast stroma)
18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19888209(leaves)
20706207(cell cycle interactome (cell culture))
19995723(chloroplast reference proteome)
21173025(root proteome)

Comparative Proteomics Data

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