PPDB

The Plant Proteome Database

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AT3G55520.1   FKBP-like peptidyl-prolyl cis-trans isomerase family protein

Lab Annot. FKBP-like peptidyl-prolyl cis-trans isomerase protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G55520.2 11Arabidopsis thaliana1E-1331901001000 (0)_
AT3G55520.3 11Arabidopsis thaliana1E-1331901001000 (0)_
AT5G48570.1 11Arabidopsis thaliana6E-2512546620 (0)_
Os05g38370.1 7Oryza sativa8E-8617677921 (1)_
Os01g62610.1 7Oryza sativa2E-7817576900 (0)_
Os05g38370.2 7Oryza sativa1E-7713976901 (1)_
GRMZM2G035922_P01 3.21Zea mays2E-8417677912 (2)_
v1_GRMZM2G035922_P01 4a53Zea mays2E-8417677911 (1)_
Zm00001eb289600_P002 agpv5Zea mays2E-8417677910 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF5401(1) FKBP_C(1)
TargetP: Cytoplasm (Class 2 C0.063; M0.124; S0.175; _0.862)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 190 aa (-cTP 171)
Molecular Weight 20.35 kDA(-cTP )
PI 8.39(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2047Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help