PPDB

PPDB	The Plant Proteome Database

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AT3G55480.2 protein affected traf%26#64257%3Bcking 2

Lab Annot.

Mapman: 31.4 cell.vesicle transport

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G55480.1 11 Arabidopsis thaliana 0 987 100 100 0 (0) S
AT4G23460.1 11 Arabidopsis thaliana 1E-28 208 38 60 166 (68) _
AT4G11380.1 11 Arabidopsis thaliana 1E-26 211 37 59 213 (61) _
Os01g74180.1 7 Oryza sativa 0 1118 50 65 5 (5) M
Os01g74180.2 7 Oryza sativa 0 1002 47 63 5 (5) S
Os03g23950.1 7 Oryza sativa 6E-29 211 37 60 56 (56) _
Zm00001eb260950_P001 agpv5 Zea mays 0 1130 49 65 0 (0) M
AC205677.3_FGP001 3.21 Zea mays 0 1172 47 63 1 (0) M
v1_AC205677.3_FGP001 4a53 Zea mays 0 1172 47 63 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Adaptin_N(1) AP3B1_C(1) Cnd1(3) HEAT(4) HEAT_2(2) HTH_36(2) RICTOR_V(1) Svf1_C(1
TargetP:	Cytoplasm (Class 3 C0.029; M0.199; S0.251; _0.710)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	1115 aa (-cTP 1103)
Molecular Weight	122.99 kDA(-cTP )
PI	5.33(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data