PPDB

The Plant Proteome Database

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AT3G55430.1   O-Glycosyl hydrolases family 17 protein

Lab Annot. glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative
Mapman: 26.4 misc.beta 1,3 glucan hydrolases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G39640.1 11Arabidopsis thaliana044857710 (0)S
AT5G24318.1 11Arabidopsis thaliana2E-14145346640 (0)S
AT5G24318.2 11Arabidopsis thaliana1E-13844746640 (0)S
Os11g47820.1 7Oryza sativa5E-14843950681 (1)S
Os11g47820.2 7Oryza sativa3E-12443945611 (1)S
Os07g13580.2 7Oryza sativa9E-11036750660 (0)S
v1_GRMZM2G111143_P02 4a53Zea mays2E-12843448645 (5)_
GRMZM2G111143_P02 3.21Zea mays2E-12843448642 (2)_
Zm00001eb091470_P001 agpv5Zea mays2E-12843448640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_17(1) X8(1)
TargetP: Secreted (Class 1 C0.010; M0.007; S0.973; _0.035)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 449 aa (-cTP 380)
Molecular Weight 48.44 kDA(-cTP )
PI 9.49(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

15593128(Cell Wall proteome)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21413152(Xylem-sap (BrassicaOleracea))
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help