PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G55370.2   OBF-binding protein 3

Lab Annot.
Mapman: 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family
Curated Location
TAIR curated location: nucleus15659636
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G55370.1 11Arabidopsis thaliana035491910 (0)C
AT3G55370.3 11Arabidopsis thaliana039980800 (0)_
AT2G37590.1 11Arabidopsis thaliana5E-4214654590 (0)_
Os07g13260.1 7Oryza sativa9E-459376800 (0)_
Os05g02150.1 7Oryza sativa4E-4419544590 (0)_
Os03g60630.1 7Oryza sativa3E-4127939530 (0)_
GRMZM2G017470_P01 3.21Zea mays3E-4527939550 (0)_
Zm00001eb062640_P002 agpv5Zea mays3E-4527939550 (0)_
v1_GRMZM2G017470_P01 4a53Zea mays3E-4527939550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: zf-Dof(1)
TargetP: Chloroplast (Class 5 C0.469; M0.094; S0.006; _0.418)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 354 aa (-cTP 296)
Molecular Weight 38.89 kDA(-cTP 32.40)
PI 9.35(-cTP 9.53)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help