PPDB

The Plant Proteome Database

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AT3G55080.1   SET domain-containing protein

Lab Annot. SET domain-containing protein
Mapman: 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G55080.5 11Arabidopsis thaliana03791001000 (0)_
AT3G55080.3 11Arabidopsis thaliana03791001000 (0)_
AT3G55080.4 11Arabidopsis thaliana03481001000 (0)M
Os01g74500.1 7Oryza sativa3E-5529136560 (0)M
Os09g24530.1 7Oryza sativa2E-19398244412 (12)C
Os02g49326.1 7Oryza sativa4E-17399254410 (10)M
Zm00001eb189210_P003 agpv5Zea mays4E-2142924460 (0)C
v1_GRMZM2G077258_P03 4a53Zea mays4E-21429244618 (18)C
GRMZM2G077258_P03 3.21Zea mays4E-21429244643 (25)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Mnd1(1) Rubis-subs-bind(1) SET(1)
TargetP: Mitochondria (Class 3 C0.125; M0.697; S0.021; _0.037)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 463 aa (-cTP 424)
Molecular Weight 52.69 kDA(-cTP )
PI 6.87(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
776Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (rep. 3 - 10 ug)

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data


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