PPDB

The Plant Proteome Database

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AT3G55005.1   tonneau 1b (TON1b)

Lab Annot. TON1B (TONNEAU 1B)
Mapman: 31.1 cell.organisation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G55000.1 11Arabidopsis thaliana1E-148261848910 (10)_
Os12g01170.1 7Oryza sativa1E-11225964799 (9)_
Os11g01170.1 7Oryza sativa4E-11225964799 (9)M
GRMZM2G151268_P04 3.21Zea mays2E-112257658021 (21)_
Zm00001eb094350_P002 agpv5Zea mays2E-11225765800 (0)_
Zm00001eb094350_P001 agpv5Zea mays3E-10926663770 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FOP_dimer(1) LisH_2(1)
TargetP: Cytoplasm (Class 2 C0.127; M0.133; S0.039; _0.889)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 257 aa (-cTP 228)
Molecular Weight 29.19 kDA(-cTP )
PI 5.06(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19525416(leaf (wt and clpr4-1 mutant))
20706207(contaminants cell cycle interactome (cell culture))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help