PPDB

 The Plant Proteome Database

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AT3G54990.1   Integrase-type DNA-binding superfamily protein
Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
TAIR curated location: nucleus7919989
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G54990.2 11Arabidopsis thaliana9E-1802381001001 (1)_
AT2G39250.1 11Arabidopsis thaliana4E-12334958680 (0)_
AT2G39250.2 11Arabidopsis thaliana9E-7624160700 (0)_
Os03g60430.2 7Oryza sativa2E-5015562740 (0)_
Os03g60430.1 7Oryza sativa4E-4912073850 (0)_
Os07g13170.2 7Oryza sativa7E-4414162740 (0)_
GRMZM5G862109_P01 3.21Zea mays3E-5115463750 (0)_
Zm00001eb062460_P001 agpv5Zea mays3E-5115463750 (0)_
GRMZM5G862109_P03 3.21Zea mays4E-5111975850 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AP2(1)
TargetP: Cytoplasm (Class 2 C0.205; M0.083; S0.063; _0.859)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 346 aa (-cTP 319)
Molecular Weight 38.67 kDA(-cTP )
PI 9.29(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1687Detail        [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help