PPDB

PPDB	The Plant Proteome Database

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AT3G54980.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G54980.2 11 Arabidopsis thaliana 0 851 100 100 0 (0) M
AT2G39230.1 11 Arabidopsis thaliana 0 852 59 76 3 (3) M
AT5G59900.1 11 Arabidopsis thaliana 2E-88 801 27 47 0 (0) M
Os01g42620.1 7 Oryza sativa 4E-148 612 39 60 0 (0) C
Os01g42620.2 7 Oryza sativa 4E-148 612 39 60 0 (0) C
Os05g19390.1 7 Oryza sativa 2E-82 827 26 45 0 (0) M
GRMZM2G064708_P01 3.21 Zea mays 2E-138 624 35 57 0 (0) M
v1_GRMZM2G064708_P01 4a53 Zea mays 2E-138 624 35 57 0 (0) M
Zm00001eb161890_P001 agpv5 Zea mays 2E-138 624 35 57 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_17(1) ADK(2) ATP13(4) DUF2095(2) ECSIT(4) LuxS(4) MRP-S27(7) Mtf2(2) PPR(19)
TargetP:	Mitochondria (Class 2 C0.160; M0.832; S0.007; _0.040)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	851 aa (-cTP 824)
Molecular Weight	95.06 kDA(-cTP )
PI	5.66(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
755	Detail								[A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data