PPDB

The Plant Proteome Database

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AT3G54826.1   Zim17-type zinc finger protein

Lab Annot.
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G68730.1 11Arabidopsis thaliana2E-0654375315 (11)C
AT5G27280.1 11Arabidopsis thaliana7E-0681304910 (5)C
Os02g57430.1 7Oryza sativa3E-5419253600 (0)M
GRMZM2G064608_P01 3.21Zea mays4E-5714060760 (0)M
v1_GRMZM2G064608_P01 4a53Zea mays4E-5714060760 (0)M
Zm00001eb259110_P001 agpv5Zea mays4E-5714060760 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Elf1(1) NUP214(1) YABBY(2) zf-DNL(1)
TargetP: Chloroplast (Class 5 C0.319; M0.180; S0.011; _0.030)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 223 aa (-cTP 195)
Molecular Weight 25.00 kDA(-cTP 21.63)
PI 9.04(-cTP 8.34)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help