PPDB

PPDB	The Plant Proteome Database

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AT3G54670.1 Structural maintenance of chromosomes (SMC) family protein

Lab Annot.

Structural maintenance of chromosomes (SMC) protein
Mapman: 31.2 cell.division

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G54670.3 10 Arabidopsis thaliana 0 1239 98 98 13 (3) _
AT3G54670.2 10 Arabidopsis thaliana 0 453 100 100 0 (0) _
AT5G48600.1 11 Arabidopsis thaliana 8E-82 1318 25 47 2 (1) _
Os12g44390.1 7 Oryza sativa 0 556 56 76 2 (2) _
Os05g41750.1 7 Oryza sativa 3E-34 388 25 50 2 (2) _
Os02g04050.1 7 Oryza sativa 5E-22 720 24 43 0 (0) _
Zm00001eb038490_P001 agpv5 Zea mays 0 1214 61 77 0 (0) _
GRMZM2G416069_P02 3.21 Zea mays 0 530 60 78 3 (1) _
v1_GRMZM2G416069_P03 4a53 Zea mays 8E-167 433 58 75 19 (19) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_15(1) AAA_21(2) AAA_23(4) AAA_29(1) Baculo_PEP_C(5) DUF1664(6) DUF3450(4) Ez
TargetP:	Cytoplasm (Class 3 C0.132; M0.129; S0.199; _0.763)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1218 aa (-cTP 1154)
Molecular Weight	140.91 kDA(-cTP )
PI	7.77(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
325	Detail								BY2 cell suspension [Tobacco]	cell wall enriched	wild-type
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1532	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	clps (rep. 1)
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
18463617(suspension cells-phosphorylated proteins)
21166475(cytosolic-fractions-crude)
21607647(SUMOylated proteome)

Comparative Proteomics Data