PPDB

PPDB	The Plant Proteome Database

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AT3G54560.1 histone H2A 11

Lab Annot.

histone - HTA11)
Mapman: 28.1.3 DNA.synthesis/chromatin structure.histone

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G54560.2 11 Arabidopsis thaliana 3E-94 136 100 100 0 (0) _
AT2G38810.3 11 Arabidopsis thaliana 1E-79 136 90 94 14 (14) C
AT2G38810.2 11 Arabidopsis thaliana 1E-79 136 90 94 14 (14) C
Os03g53190.2 7 Oryza sativa 1E-75 137 86 93 61 (61) _
Os03g53190.1 7 Oryza sativa 1E-75 137 86 93 61 (61) _
Os03g06670.1 7 Oryza sativa 3E-73 138 85 91 61 (61) _
Zm00001eb004730_P001 agpv5 Zea mays 4E-83 138 89 95 0 (0) _
GRMZM2G056231_P01 3.21 Zea mays 4E-83 138 89 95 176 (176) _
v1_GRMZM2G056231_P01 4a53 Zea mays 4E-83 138 89 95 217 (217) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBFD_NFYB_HMF(1) Histone(1) Histone_H2A_C(1)
TargetP:	Cytoplasm (Class 2 C0.231; M0.101; S0.011; _0.857)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	136 aa (-cTP 83)
Molecular Weight	14.54 kDA(-cTP )
PI	10.32(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1408	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1432	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1611	Detail								leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
1613	Detail								Natural Senescence leaf [A. thaliana]
1651	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	wild-type
1828	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0 Fluctuating light
1829	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1 Fluctuating light

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data