PPDB

PPDB	The Plant Proteome Database

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AT3G54460.1 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein

Lab Annot.

SNF2 domain/ helicase domain / F-box protein
Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G54460.2 11 Arabidopsis thaliana 0 1081 100 100 0 (0) S
AT5G22750.1 11 Arabidopsis thaliana 6E-33 618 25 40 0 (0) _
AT5G43530.1 11 Arabidopsis thaliana 4E-31 614 26 42 0 (0) _
Os01g72310.1 7 Oryza sativa 0 1285 52 67 0 (0) _
Os02g32570.2 7 Oryza sativa 1E-36 623 24 40 0 (0) _
Os02g32570.1 7 Oryza sativa 4E-36 623 24 40 0 (0) _
v1_GRMZM2G379804_P01 4a53 Zea mays 0 1047 52 67 0 (0) _
GRMZM2G379804_P01 3.21 Zea mays 0 1047 52 67 0 (0) _
Zm00001eb140820_P001 agpv5 Zea mays 7E-139 615 41 57 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	F-box(2) F-box-like(2) Helicase_C(1) Prok-RING_4(1) ResIII(2) SNF2_N(1) zf-C3HC4
TargetP:	Secreted (Class 4 C0.033; M0.013; S0.688; _0.384)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1378 aa (-cTP 1340)
Molecular Weight	155.41 kDA(-cTP )
PI	7.03(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data