PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G54450.1   Major facilitator superfamily protein

Lab Annot.
Mapman: 34.13 transport.peptides and oligopeptides
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G72125.1 11Arabidopsis thaliana2E-15555043640 (0)_
AT1G22540.1 11Arabidopsis thaliana3E-15455143640 (0)_
AT1G72120.1 11Arabidopsis thaliana5E-15455843640 (0)_
Os01g04950.2 7Oryza sativa7E-14955639610 (0)_
Os01g04950.3 7Oryza sativa7E-14955639610 (0)_
Os01g04950.1 7Oryza sativa7E-14955639610 (0)_
GRMZM2G378604_P02 3.21Zea mays2E-15655241610 (0)_
v1_GRMZM2G378604_P02 4a53Zea mays2E-15655241610 (0)_
GRMZM2G378604_P01 3.21Zea mays7E-15155241610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MFS_1(2) PTR2(1)
TargetP: Cytoplasm (Class 2 C0.006; M0.173; S0.148; _0.833)
Predotar:
Subcel. Location:
TM-HMM prediction: 11 TMs
Aramemnon: 9 TMs
TAT position:
Length 555 aa (-cTP 503)
Molecular Weight 62.30 kDA(-cTP )
PI 8.88(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help