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AT3G54390.1 sequence-specific DNA binding transcription factor

Lab Annot.

sequence-specific DNA binding transcription factors
Mapman: 27.3.30 RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G54390.2 11 Arabidopsis thaliana 0 296 100 100 0 (0) _
AT3G10030.1 11 Arabidopsis thaliana 5E-17 112 41 60 0 (0) _
AT3G10030.2 11 Arabidopsis thaliana 6E-17 112 41 60 0 (0) _
Os09g38570.1 7 Oryza sativa 3E-43 290 43 53 0 (0) _
Os04g36790.1 7 Oryza sativa 6E-22 266 28 45 0 (0) _
Os02g35690.1 7 Oryza sativa 2E-16 274 29 43 0 (0) C
Zm00001eb104640_P002 agpv5 Zea mays 9E-45 291 38 53 0 (0) _
v1_GRMZM2G153575_P01 4a53 Zea mays 9E-45 291 38 53 0 (0) _
GRMZM2G375307_P02 3.21 Zea mays 1E-44 312 39 53 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF573(2) MADF_DNA_bdg(1) Myb_DNA-bind_3(1) Myb_DNA-bind_4(2) Myb_DNA-binding(1)
TargetP:	Cytoplasm (Class 3 C0.450; M0.044; S0.048; _0.866)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	296 aa (-cTP 272)
Molecular Weight	33.28 kDA(-cTP )
PI	9.43(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1538	Detail								leaf [A. thaliana]	plastid RNCs thylakoid membrane	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data