PPDB

PPDB	The Plant Proteome Database

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AT3G54360.1 zinc ion binding protein

Lab Annot.

zinc ion binding
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G54360.2 11 Arabidopsis thaliana 0 405 100 100 0 (0) C
Os02g55200.1 7 Oryza sativa 7E-155 372 60 74 0 (0) C
Os02g55200.2 7 Oryza sativa 7E-155 372 60 74 0 (0) C
Os01g01420.2 7 Oryza sativa 8E-155 379 59 73 0 (0) _
Zm00001eb126920_P001 agpv5 Zea mays 4E-153 381 58 71 0 (0) C
Zm00001eb126920_P002 agpv5 Zea mays 4E-153 381 58 71 0 (0) C
Zm00001eb126920_P003 agpv5 Zea mays 4E-153 381 58 71 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(1) TPR_1(2) TPR_10(2) TPR_12(2) TPR_2(2) TPR_7(2) TPR_8(2) zf-C3HC4(
TargetP:	Chloroplast (Class 5 C0.594; M0.088; S0.036; _0.539)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	405 aa (-cTP 362)
Molecular Weight	44.53 kDA(-cTP 40.10)
PI	5.14(-cTP 5.05)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)
20706207(contaminants cell cycle interactome (cell culture))
21173025(root proteome)

Comparative Proteomics Data