PPDB

 The Plant Proteome Database

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AT3G54320.1   Integrase-type DNA-binding superfamily protein
Lab Annot. APETALA2 (AP2)-type transcription factor WRINKLED 1 (WRI1)
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G54320.3 11Arabidopsis thaliana04291001000 (0)C
AT3G54320.4 11Arabidopsis thaliana03311001000 (0)S
AT3G54320.5 11Arabidopsis thaliana03311001000 (0)S
Os11g03540.1 7Oryza sativa7E-9120174820 (0)C
Os06g05340.1 7Oryza sativa1E-9025160710 (0)_
Os12g03290.1 7Oryza sativa3E-8919775830 (0)C
v1_GRMZM2G124524_P01 4a53Zea mays3E-9634850630 (0)C
GRMZM2G124524_P01 3.21Zea mays3E-9634850630 (0)C
Zm00001eb093560_P001 agpv5Zea mays3E-9634850630 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AP2(2)
TargetP: Chloroplast (Class 1 C0.974; M0.083; S0.005; _0.049)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 438 aa (-cTP 381)
Molecular Weight 49.30 kDA(-cTP 43.37)
PI 5.17(-cTP 4.77)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help