PPDB

 The Plant Proteome Database

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AT3G54300.1   vesicle-associated membrane protein 727
Lab Annot. vesicle-associated membrane protein 727
Mapman: 31.4 cell.vesicle transport
Curated Location
TAIR curated location: endosome15876431
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G54300.3 11Arabidopsis thaliana02401001000 (0)S
AT3G54300.2 11Arabidopsis thaliana02401001001 (1)S
AT1G04760.2 11Arabidopsis thaliana3E-9623956740 (0)_
Os08g44430.2 7Oryza sativa2E-12923875870 (0)S
Os08g44430.1 7Oryza sativa2E-12923875870 (0)S
Os07g09600.1 7Oryza sativa9E-94238587626 (26)S
v1_GRMZM2G167836_P01 4a53Zea mays1E-13423873880 (0)S
GRMZM2G167836_P02 3.21Zea mays1E-13423873880 (0)S
GRMZM2G167836_P03 3.21Zea mays1E-13423873880 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Longin(1) PLDc_2(1) Synaptobrevin(1)
TargetP: Secreted (Class 4 C0.026; M0.073; S0.577; _0.277)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 240 aa (-cTP 172)
Molecular Weight 27.46 kDA(-cTP )
PI 6.00(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

 18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help