PPDB

PPDB	The Plant Proteome Database

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AT3G54280.1 ROOT GROWTH DEFECTIVE 3

Lab Annot.

DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases
Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G54280.2 11 Arabidopsis thaliana 0 2076 98 98 0 (0) M
AT5G19310.2 11 Arabidopsis thaliana 6E-71 553 32 48 0 (0) _
AT3G06010.1 11 Arabidopsis thaliana 7E-70 524 32 50 8 (8) _
Os02g06592.1 7 Oryza sativa 0 571 73 84 0 (0) S
Os02g06588.1 7 Oryza sativa 1E-149 460 53 71 0 (0) M
Os04g59624.3 7 Oryza sativa 1E-74 561 32 49 0 (0) _
GRMZM2G168096_P01 3.21 Zea mays 0 2063 60 75 1 (0) M
v1_GRMZM2G168096_P01 4a53 Zea mays 0 2063 60 75 0 (0) M
Zm00001eb297280_P001 agpv5 Zea mays 0 2068 60 75 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3535(3) HEAT(8) HEAT_2(4) HEAT_EZ(7) Helicase_C(1) L27(2) ResIII(1) SNF2_N(2)
TargetP:	Mitochondria (Class 2 C0.039; M0.799; S0.004; _0.120)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	3 TMs
TAT position:
Length	2045 aa (-cTP 2020)
Molecular Weight	227.05 kDA(-cTP )
PI	5.55(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17216043(leaf)
22060019(phosphoproteome - N-starved seedlings)
21533090(plasmodesmata-crude)

Comparative Proteomics Data