PPDB

PPDB	The Plant Proteome Database

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AT3G54230.1 suppressor of abi3-5

Lab Annot.

suppressor of abi3-5
Mapman: 27.4 RNA.RNA binding

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G54230.5 11 Arabidopsis thaliana 0 1007 100 100 0 (0) _
AT3G54230.2 11 Arabidopsis thaliana 0 1008 99 99 0 (0) _
AT3G54230.4 11 Arabidopsis thaliana 0 963 100 100 0 (0) _
Os02g07070.1 7 Oryza sativa 0 1076 50 63 0 (0) _
Os02g07070.2 7 Oryza sativa 0 912 51 64 0 (0) _
Os02g07070.3 7 Oryza sativa 0 956 49 61 0 (0) _
Zm00001eb306360_P005 agpv5 Zea mays 0 1086 51 63 0 (0) _
Zm00001eb306360_P001 agpv5 Zea mays 0 1068 51 63 0 (0) _
GRMZM2G173777_P01 3.21 Zea mays 0 1069 50 62 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	G-patch(1) G-patch_2(1) OCRE(1) RRM_1(2) zf-RanBP(1)
TargetP:	Cytoplasm (Class 3 C0.058; M0.337; S0.085; _0.861)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	1007 aa (-cTP 989)
Molecular Weight	112.57 kDA(-cTP )
PI	6.90(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data