PPDB

PPDB	The Plant Proteome Database

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AT3G54010.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein

Lab Annot.

Mapman: 31.3.1 cell.cycle.peptidylprolyl isomerase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G54010.2 11 Arabidopsis thaliana 0 545 100 100 2 (1) _
AT3G25230.1 11 Arabidopsis thaliana 1E-60 533 30 48 133 (56) _
AT3G25230.2 11 Arabidopsis thaliana 1E-60 533 30 48 131 (54) _
Os03g25140.1 7 Oryza sativa 0 610 66 79 1 (1) _
Os04g28420.1 7 Oryza sativa 1E-58 533 31 49 3 (3) _
Os04g28420.2 7 Oryza sativa 1E-58 533 31 49 3 (3) _
Zm00001eb017910_P001 agpv5 Zea mays 0 630 64 79 0 (0) _
Zm00001eb394230_P002 agpv5 Zea mays 0 621 65 79 0 (0) _
v1_GRMZM2G117746_P01 4a53 Zea mays 0 621 65 79 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(1) FKBP_C(3) TPR_1(3) TPR_11(3) TPR_12(1) TPR_14(2) TPR_16(2) TPR_19(2) T
TargetP:	Cytoplasm (Class 1 C0.121; M0.116; S0.043; _0.930)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	635 aa (-cTP 567)
Molecular Weight	71.80 kDA(-cTP )
PI	5.32(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)
21515685(GreenCut2)

Comparative Proteomics Data