PPDB

The Plant Proteome Database

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AT3G53980.1   Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Lab Annot. protease inhibitor/seed storage/lipid transfer protein (LTP) protein
Mapman: 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G53980.2 11Arabidopsis thaliana3E-791141001007 (7)S
AT5G05960.1 11Arabidopsis thaliana5E-4610863790 (0)S
AT2G37870.1 11Arabidopsis thaliana2E-2511142622 (2)S
Os01g62980.1 7Oryza sativa1E-389461760 (0)S
Os04g33920.1 7Oryza sativa2E-379462750 (0)S
Os01g62980.2 7Oryza sativa7E-379461760 (0)S
Zm00001eb090910_P001 agpv5Zea mays1E-4010955710 (0)S
GRMZM2G031102_P01 3.21Zea mays1E-40109557111 (11)S
v1_GRMZM2G099867_P01 4a53Zea mays1E-40109557112 (12)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Hydrophob_seed(1) LTP_2(1) Tryp_alpha_amyl(1)
TargetP: Secreted (Class 1 C0.041; M0.023; S0.915; _0.086)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 114 aa (-cTP 33)
Molecular Weight 11.72 kDA(-cTP )
PI 8.40(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

WallDB-E.Jamet(cell wall reference proteome)
21413152(Xylem-sap (BrassicaOleracea))

Comparative Proteomics Data


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