PPDB

The Plant Proteome Database

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AT3G53970.2   proteasome inhibitor-like protein

Lab Annot. Cysteine protease inhibitor (cystatin)
Mapman: 29.5.3.7.1* protein.degradation.cysteine protease.inhibitor. IH-i25
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G53970.1 11Arabidopsis thaliana025210010025 (13)M
AT1G48530.1 11Arabidopsis thaliana5E-6115462760 (0)_
Os07g36420.1 7Oryza sativa1E-3422939520 (0)S
GRMZM2G173910_P01 3.21Zea mays6E-3324540532 (0)M
v1_GRMZM2G173910_P01 4a53Zea mays6E-3324540530 (0)M
Zm00001eb323600_P001 agpv5Zea mays6E-3324540530 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PI31_Prot_N(1)
TargetP: Mitochondria (Class 3 C0.156; M0.621; S0.080; _0.202)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 252 aa (-cTP 244)
Molecular Weight 26.92 kDA(-cTP )
PI 4.81(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2307Detail        [A. thaliana] Clp C1 TRAP
2602Detail       Rosettes [A. thaliana] total leaf tissue clpc1
2603Detail       Rosettes [A. thaliana] total leaf tissue clpc1

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Silique)
15815986(Leaf)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help