PPDB

 The Plant Proteome Database

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AT3G53960.1   Major facilitator superfamily protein
Lab Annot. Major facilitator protein
Mapman: 34.13 transport.peptides and oligopeptides
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G37900.1 11Arabidopsis thaliana057976860 (0)_
AT2G37900.2 11Arabidopsis thaliana050076860 (0)S
AT3G54140.1 11Arabidopsis thaliana2E-15156540610 (0)_
Os03g60850.1 7Oryza sativa057755710 (0)_
Os10g33210.1 7Oryza sativa6E-15257940600 (0)_
Os03g13240.1 7Oryza sativa4E-14957240600 (0)_
v1_GRMZM2G143998_P01 4a53Zea mays058253682 (2)_
GRMZM2G143998_P01 3.21Zea mays058253680 (0)_
GRMZM2G055834_P01 3.21Zea mays059952680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BBS1(1) DUF5083(5) MFS_1(3) PTR2(1)
TargetP: Cytoplasm (Class 1 C0.108; M0.079; S0.030; _0.957)
Predotar:
Subcel. Location:
TM-HMM prediction: 10 TMs
Aramemnon: 12 TMs
TAT position:
Length 602 aa (-cTP 567)
Molecular Weight 67.06 kDA(-cTP )
PI 6.84(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 17317660(Plasma Membrane proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help