PPDB

The Plant Proteome Database

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AT3G53780.1   RHOMBOID-like protein 4

Lab Annot. rhomboid protease 4 (AtRBL4) - likely in PM
Mapman: 29.5.5.10* protein.degradation.serine protease ST.S54
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G53780.2 11Arabidopsis thaliana02701001000 (0)_
AT3G53780.3 11Arabidopsis thaliana2E-1281881001000 (0)_
AT2G29050.1 11Arabidopsis thaliana2E-12027560750 (0)_
Os11g47840.1 7Oryza sativa4E-11927458740 (0)_
Os09g35730.1 7Oryza sativa4E-102225628049 (49)_
Os08g43320.1 7Oryza sativa6E-100225598024 (24)_
Zm00001eb124440_P002 agpv5Zea mays1E-12127561780 (0)_
Zm00001eb124440_P001 agpv5Zea mays1E-12127561780 (0)_
Zm00001eb124440_P003 agpv5Zea mays1E-12127561780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Rhomboid(2)
TargetP: Cytoplasm (Class 2 C0.009; M0.194; S0.028; _0.935)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 7 TMs
TAT position:
Length 270 aa (-cTP 192)
Molecular Weight 29.45 kDA(-cTP )
PI 9.26(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
21533090(plasmodesmata-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help