PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G53740.1 Ribosomal protein L36e family protein

Lab Annot.

60S ribosomal protein L36 (RPL36B)
Mapman: 29.2.1.2.2.36 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36

Curated Location

cytosol

TAIR curated location: cytosolic ribosome (sensu Eukaryota)15821981

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G53740.2 11 Arabidopsis thaliana 1E-64 112 91 91 20 (20) C
AT3G53740.3 11 Arabidopsis thaliana 1E-64 112 91 91 20 (20) C
AT3G53740.4 11 Arabidopsis thaliana 1E-64 112 91 91 20 (20) C
Os05g38520.1 7 Oryza sativa 1E-47 113 72 80 6 (6) C
Os05g38520.2 7 Oryza sativa 1E-47 113 72 80 6 (6) C
Os05g38520.4 7 Oryza sativa 1E-47 113 72 80 3 (3) C
GRMZM5G850966_P03 3.21 Zea mays 2E-43 111 67 76 38 (38) C
GRMZM5G850966_P02 3.21 Zea mays 2E-43 111 67 76 38 (38) C
Zm00001eb289680_P002 agpv5 Zea mays 2E-43 111 67 76 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4919(1) LemA(1) Ribosomal_L36e(1)
TargetP:	Chloroplast (Class 5 C0.457; M0.273; S0.009; _0.274)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	103 aa (-cTP 73)
Molecular Weight	11.68 kDA(-cTP 8.34)
PI	11.78(-cTP 11.52)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1525	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1749	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1757	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1758	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag+fosmidomycin
1930	Detail								leaf [A. thaliana]	total leaf tissue	Col_0 Wild-type
1931	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1932	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
2182	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2184	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2255	Detail								leaf [A. thaliana]	total seedlings	gfs9
2256	Detail								leaf [A. thaliana]	total seedlings	gfs9
2257	Detail								leaf [A. thaliana]	total seedlings	gfs9
2259	Detail								leaf [A. thaliana]	total seedlings	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

15821981(crude&pure 80S ribosome)
17934214(cytosolic ribosome)
17151019(vacuole - suspension cell)
17432890(leaf total membranes)
20061580(chloroplast envelope (inner+outer))
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data