PPDB

PPDB	The Plant Proteome Database

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AT3G53690.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G14250.1 11 Arabidopsis thaliana 7E-61 197 46 64 0 (0) _
AT4G19670.7 11 Arabidopsis thaliana 1E-37 215 36 51 0 (0) _
AT4G19670.6 11 Arabidopsis thaliana 1E-37 215 36 51 0 (0) _
Os09g25190.1 7 Oryza sativa 1E-73 214 50 67 0 (0) _
Os09g25220.1 7 Oryza sativa 3E-68 230 43 61 0 (0) _
Os08g35060.1 7 Oryza sativa 2E-67 201 46 68 0 (0) _
GRMZM2G125867_P01 3.21 Zea mays 5E-69 228 46 66 0 (0) _
GRMZM2G125867_P02 3.21 Zea mays 5E-69 228 46 66 0 (0) _
v1_GRMZM2G125867_P01 4a53 Zea mays 5E-69 228 46 66 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	IBR(4) PIN_11(2) zf-C3HC4(1) zf-C3HC4_2(2) zf-Nse(3) zf-RING_2(4) zf-RING_5(2) z
TargetP:	Cytoplasm (Class 2 C0.193; M0.045; S0.179; _0.838)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	320 aa (-cTP 283)
Molecular Weight	36.55 kDA(-cTP )
PI	5.95(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data