PPDB

PPDB	The Plant Proteome Database

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AT3G53650.1 Histone superfamily protein

Lab Annot.

histone H2B, putative
Mapman: 28.1.3 DNA.synthesis/chromatin structure.histone

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G37470.1 11 Arabidopsis thaliana 1E-80 138 92 97 47 (47) _
AT2G28720.1 11 Arabidopsis thaliana 5E-71 151 81 85 132 (130) _
AT3G45980.1 11 Arabidopsis thaliana 1E-70 150 80 86 123 (122) _
Os08g38300.1 7 Oryza sativa 5E-59 134 76 86 31 (31) _
Os01g62230.1 7 Oryza sativa 4E-58 92 91 97 31 (31) _
Os03g17084.1 7 Oryza sativa 3E-57 136 77 86 31 (31) _
GRMZM2G057852_P01 3.21 Zea mays 2E-60 134 76 85 345 (289) _
v1_GRMZM2G057852_P01 4a53 Zea mays 2E-60 134 76 85 254 (252) _
Zm00001eb099910_P001 agpv5 Zea mays 2E-60 134 76 85 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBFD_NFYB_HMF(2) Histone(1) RP-C(2) TFIID_20kDa(1)
TargetP:	Cytoplasm (Class 1 C0.084; M0.080; S0.068; _0.933)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	138 aa (-cTP 134)
Molecular Weight	15.22 kDA(-cTP )
PI	10.08(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
244	Detail								leaf [A. thaliana]	total leaf tissue	clpr2-1
1615	Detail								Natural Senescence leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data