PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G53520.4   UDP-glucuronic acid decarboxylase 1
Lab Annot.
Mapman:
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G53520.1 11Arabidopsis thaliana046093931 (1)_
AT3G53520.2 11Arabidopsis thaliana046093931 (1)_
AT3G53520.3 11Arabidopsis thaliana033798981 (1)_
Os03g17230.1 7Oryza sativa045566750 (0)M
Os05g29990.1 7Oryza sativa0442647314 (14)_
Os07g47700.1 7Oryza sativa045263738 (8)_
v1_GRMZM2G347717_P02 4a53Zea mays045568760 (0)M
Zm00001eb397360_P002 agpv5Zea mays045568760 (0)M
GRMZM2G347717_P02 3.21Zea mays045568761 (1)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 3Beta_HSD(1) Epimerase(1) GDP_Man_Dehyd(1) NAD_binding_4(2) Polysacc_synt_2(2) R
TargetP: Cytoplasm (Class 3 C0.178; M0.095; S0.006; _0.733)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 458 aa (-cTP 390)
Molecular Weight 51.39 kDA(-cTP )
PI 9.15(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2273Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
22430844(Golgi-cell-culture)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help