PPDB

PPDB	The Plant Proteome Database

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AT3G53520.1 UDP-glucuronic acid decarboxylase 1

Lab Annot.

UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1)
Mapman: 10.1.5 cell wall.precursor synthesis.UXS

Curated Location

TAIR curated location: membrane12481102

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G53520.2 11 Arabidopsis thaliana 0 435 99 99 1 (1) _
AT3G53520.4 11 Arabidopsis thaliana 0 460 93 93 1 (1) _
AT3G53520.3 11 Arabidopsis thaliana 0 337 100 100 1 (1) _
Os03g17230.1 7 Oryza sativa 0 430 70 81 0 (0) M
Os05g29990.1 7 Oryza sativa 0 417 69 78 14 (14) _
Os07g47700.1 7 Oryza sativa 0 427 67 78 8 (8) _
v1_GRMZM2G347717_P02 4a53 Zea mays 0 430 73 81 0 (0) M
Zm00001eb397360_P002 agpv5 Zea mays 0 430 73 81 0 (0) M
GRMZM2G347717_P02 3.21 Zea mays 0 430 73 81 1 (1) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	3Beta_HSD(1) Epimerase(1) GDP_Man_Dehyd(1) NAD_binding_4(2) Polysacc_synt_2(2) R
TargetP:	Cytoplasm (Class 3 C0.178; M0.095; S0.006; _0.733)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	435 aa (-cTP 367)
Molecular Weight	48.63 kDA(-cTP )
PI	9.21(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2273	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(Golgi)
17432890(leaf total membranes)
18463617(suspension cells-phosphorylated proteins)
18931141(peroxisomes- high&low purity (cell culture))
19200160(flower-stage 12)
20118269(developing seeds)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
22430844(Golgi-cell-culture)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data