PPDB

PPDB	The Plant Proteome Database

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AT3G53490.1 valine-tRNA ligase

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G02720.2 11 Arabidopsis thaliana 8E-73 217 49 69 0 (0) S
AT5G02720.1 11 Arabidopsis thaliana 2E-36 142 45 66 0 (0) _
Os03g17440.1 7 Oryza sativa 9E-79 211 54 71 0 (0) M
Os05g34680.2 7 Oryza sativa 3E-14 82 45 63 0 (0) S
Os05g34680.1 7 Oryza sativa 3E-14 82 45 63 0 (0) S
Zm00001eb012900_P002 agpv5 Zea mays 2E-71 203 55 71 0 (0) M
GRMZM2G041989_P02 3.21 Zea mays 2E-71 203 55 71 0 (0) M
v1_GRMZM2G041989_P02 4a53 Zea mays 2E-71 203 55 71 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2207(1) DUF2627(1) DUF2681(1) DUF4381(1) DUF5305(1) GCM(1) LapA_dom(1) PAP_Pi
TargetP:	Secreted (Class 2 C0.025; M0.056; S0.884; _0.098)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	1 TMs
TAT position:
Length	225 aa (-cTP 166)
Molecular Weight	25.60 kDA(-cTP )
PI	5.04(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21826108(SYP trans-Golgi-filtered)

Comparative Proteomics Data