PPDB

PPDB	The Plant Proteome Database

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AT3G53410.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G09770.1 11 Arabidopsis thaliana 7E-115 264 65 77 0 (0) C
AT5G03200.1 11 Arabidopsis thaliana 1E-100 270 59 70 0 (0) M
AT3G09770.2 11 Arabidopsis thaliana 3E-91 232 62 74 0 (0) C
Os10g13670.1 7 Oryza sativa 6E-113 248 66 78 0 (0) M
Os03g15000.2 7 Oryza sativa 2E-112 252 62 75 0 (0) _
Os03g15000.1 7 Oryza sativa 6E-111 254 62 75 0 (0) _
Zm00001eb398400_P001 agpv5 Zea mays 2E-117 297 60 72 0 (0) M
Zm00001eb398400_P002 agpv5 Zea mays 2E-117 297 60 72 0 (0) M
GRMZM2G036697_P01 3.21 Zea mays 2E-117 297 60 72 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-P11(1) zf-RING_11(2) zf-RING_2(1)
TargetP:	Cytoplasm (Class 4 C0.143; M0.339; S0.029; _0.648)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	299 aa (-cTP 273)
Molecular Weight	33.60 kDA(-cTP )
PI	5.12(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data