PPDB

PPDB	The Plant Proteome Database

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AT3G53340.1 nuclear factor Y%2C subunit B10

Lab Annot.

Mapman: 27.3.15 RNA.regulation of transcription.CCAAT box binding factor family, HAP3

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G53340.5 11 Arabidopsis thaliana 2E-129 176 100 100 0 (0) _
AT2G37060.1 11 Arabidopsis thaliana 1E-99 178 81 87 0 (0) C
AT2G37060.3 11 Arabidopsis thaliana 1E-99 178 81 87 0 (0) C
Os05g38820.3 6 Oryza sativa 3E-67 135 72 82 10 (10) _
Os05g38820.1 6 Oryza sativa 3E-67 135 72 82 10 (10) _
Os05g38820.2 6 Oryza sativa 3E-67 135 72 82 10 (10) _
Zm00001eb289860_P001 agpv5 Zea mays 5E-68 132 74 84 0 (0) _
Zm00001eb289860_P005 agpv5 Zea mays 5E-68 132 74 84 0 (0) _
Zm00001eb289860_P003 agpv5 Zea mays 5E-68 132 74 84 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Bromo_TP(1) CBFD_NFYB_HMF(1) CENP-T_C(1) Histone(1)
TargetP:	Cytoplasm (Class 4 C0.401; M0.108; S0.038; _0.713)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	176 aa (-cTP 153)
Molecular Weight	19.16 kDA(-cTP )
PI	5.58(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2146	Detail								Total leaf [A. thaliana]	total soluble stroma	wt & cgep

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data