PPDB

The Plant Proteome Database

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AT3G53270.1   Small nuclear RNA activating complex (SNAPc)%2C subunit SNAP43 protein

Lab Annot. Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Mapman: 27.3 RNA.regulation of transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G53270.2 11Arabidopsis thaliana02801001001 (1)_
AT3G53270.3 11Arabidopsis thaliana02801001001 (1)_
AT3G53270.8 11Arabidopsis thaliana02801001000 (0)_
Os10g35130.1 7Oryza sativa7E-9028644690 (0)_
GRMZM2G701180_P01 3.21Zea mays1E-8226942710 (0)_
Zm00001eb288690_P002 agpv5Zea mays1E-8226942710 (0)_
Zm00001eb288690_P001 agpv5Zea mays1E-8226942710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SNAPc_SNAP43(1)
TargetP: Cytoplasm (Class 1 C0.017; M0.087; S0.102; _0.964)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 280 aa (-cTP 227)
Molecular Weight 32.45 kDA(-cTP )
PI 4.85(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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