PPDB

PPDB	The Plant Proteome Database

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AT3G53170.1 LOW protein: PPR containing protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G53170.2 11 Arabidopsis thaliana 0 499 100 100 0 (0) C
AT3G53170.3 11 Arabidopsis thaliana 0 499 94 94 0 (0) C
AT3G53170.4 11 Arabidopsis thaliana 0 440 100 100 0 (0) _
Os03g02430.1 7 Oryza sativa 0 422 58 76 0 (0) M
Os06g07550.1 7 Oryza sativa 3E-129 421 45 66 0 (0) C
Os03g19650.3 7 Oryza sativa 4E-100 408 36 61 13 (13) C
Zm00001eb001020_P001 agpv5 Zea mays 0 429 57 74 0 (0) C
v1_GRMZM2G440537_P02 4a53 Zea mays 0 429 57 74 5 (5) C
GRMZM2G440537_P02 3.21 Zea mays 0 429 57 74 5 (5) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Clathrin(4) Mtf2(5) PPR(11) PPR_1(9) PPR_2(8) PPR_3(7) PPR_long(6)
TargetP:	Chloroplast (Class 4 C0.506; M0.136; S0.029; _0.160)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	499 aa (-cTP 448)
Molecular Weight	56.40 kDA(-cTP 50.85)
PI	8.72(-cTP 8.68)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)

Comparative Proteomics Data