PPDB

 The Plant Proteome Database

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AT3G53090.1   ubiquitin-protein ligase 7
Lab Annot. ubiquitin-protein ligase 7 (UPL7)
Mapman: 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G53090.2 11Arabidopsis thaliana011421001000 (0)_
AT3G17205.2 11Arabidopsis thaliana4E-10653936572 (0)_
AT3G17205.1 11Arabidopsis thaliana5E-10653936572 (0)_
Os03g47949.1 7Oryza sativa053470840 (0)S
Os05g06690.1 7Oryza sativa3E-10855038560 (0)_
Os05g06690.2 7Oryza sativa3E-10855038560 (0)_
v1_GRMZM2G461948_P01 4a53Zea mays0116453700 (0)C
Zm00001eb217270_P001 agpv5Zea mays0116453700 (0)C
GRMZM2G461948_P01 3.21Zea mays0116453700 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HECT(1) IQ(1)
TargetP: Cytoplasm (Class 5 C0.066; M0.554; S0.004; _0.623)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 3 TMs
TAT position:
Length 1142 aa (-cTP 1130)
Molecular Weight 128.48 kDA(-cTP )
PI 7.86(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help