PPDB

The Plant Proteome Database

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AT3G53060.1   SKP1-like 6

Lab Annot. SKP1-like 6
Mapman: 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP
Curated Location
TAIR curated location: SCF ubiquitin ligase complex12970487
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G60020.1 11Arabidopsis thaliana1E-338070820 (0)_
AT3G21860.1 11Arabidopsis thaliana1E-308166790 (0)_
AT1G75950.1 11Arabidopsis thaliana4E-2990567348 (28)_
Os09g36830.1 7Oryza sativa3E-24100526617 (17)_
Os07g05180.1 7Oryza sativa9E-248052780 (0)_
Os11g26910.1 7Oryza sativa1E-2399536356 (56)_
Zm00001eb229260_P001 agpv5Zea mays5E-278856700 (0)_
v1_GRMZM2G074282_P06 4a53Zea mays5E-2788567010 (10)_
GRMZM2G074282_P04 3.21Zea mays5E-2788567015 (15)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Skp1_POZ(1)
TargetP: Cytoplasm (Class 2 C0.090; M0.106; S0.200; _0.873)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 85 aa (-cTP 81)
Molecular Weight 9.79 kDA(-cTP )
PI 4.84(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help