PPDB

PPDB	The Plant Proteome Database

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AT3G52980.1 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein

Lab Annot.

Mapman: 27.4 RNA.RNA binding

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G05160.2 11 Arabidopsis thaliana 0 383 74 81 0 (0) _
AT2G05160.1 11 Arabidopsis thaliana 0 383 74 81 0 (0) _
AT2G05160.3 11 Arabidopsis thaliana 0 383 74 81 0 (0) _
Os08g03310.5 7 Oryza sativa 2E-75 217 55 71 0 (0) _
Os08g03310.4 7 Oryza sativa 2E-75 217 55 71 0 (0) _
Os08g03310.3 7 Oryza sativa 2E-75 217 55 71 0 (0) _
v1_GRMZM2G148090_P02 4a53 Zea mays 7E-75 375 38 55 0 (0) _
GRMZM2G148090_P02 3.21 Zea mays 7E-75 375 38 55 0 (0) _
Zm00001eb404690_P001 agpv5 Zea mays 9E-74 365 40 56 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	OST-HTH(1) RRM_1(1) Torus(1) zf-CCCH(1) zf_CCCH_4(1)
TargetP:	Cytoplasm (Class 1 C0.030; M0.087; S0.023; _0.895)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	381 aa (-cTP 376)
Molecular Weight	43.30 kDA(-cTP )
PI	6.76(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17526915(glycoproteome cell wall (stems))

Comparative Proteomics Data