PPDB

PPDB	The Plant Proteome Database

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AT3G52920.1 transcriptional activator (DUF662)

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G52920.2 11 Arabidopsis thaliana 7E-122 180 98 98 1 (1) C
AT2G36410.1 11 Arabidopsis thaliana 3E-88 149 87 96 0 (0) C
AT2G36410.2 11 Arabidopsis thaliana 6E-85 149 85 95 0 (0) C
Os04g33450.2 7 Oryza sativa 5E-53 134 62 85 1 (1) _
Os04g33450.1 7 Oryza sativa 2E-45 113 63 84 1 (1) _
Os02g32650.1 7 Oryza sativa 3E-42 141 57 80 0 (0) _
GRMZM2G147390_P01 3.21 Zea mays 5E-54 166 54 74 0 (0) _
Zm00001eb421850_P002 agpv5 Zea mays 5E-54 166 54 74 0 (0) _
v1_GRMZM2G147390_P01 4a53 Zea mays 5E-54 166 54 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Atg14(1) Baculo_PEP_C(1) DUF148(2) DUF1664(2) DUF1690(2) DUF4407(1) DUF948(1) Ef
TargetP:	Chloroplast (Class 5 C0.597; M0.081; S0.108; _0.436)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	180 aa (-cTP 143)
Molecular Weight	20.98 kDA(-cTP 16.89)
PI	6.53(-cTP 9.03)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)

Comparative Proteomics Data