PPDB

PPDB	The Plant Proteome Database

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AT3G52840.1 beta-galactosidase 2

Lab Annot.

beta-galactosidase 2 (BGAL2)
Mapman: 10.6.2 cell wall.degradation.mannan-xylose-arabinose-fucose

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G52840.2 11 Arabidopsis thaliana 0 727 100 100 0 (0) S
AT4G26140.1 11 Arabidopsis thaliana 0 729 81 89 0 (0) S
AT4G26140.7 11 Arabidopsis thaliana 0 754 78 86 0 (0) S
Os01g39830.1 7 Oryza sativa 0 703 66 80 0 (0) S
Os02g12730.1 7 Oryza sativa 0 703 63 80 4 (4) S
Os06g37560.1 7 Oryza sativa 0 698 65 79 12 (12) S
Zm00001eb160380_P001 agpv5 Zea mays 0 699 67 79 0 (0) S
v1_GRMZM2G130375_P03 4a53 Zea mays 0 699 67 79 0 (0) S
GRMZM2G130375_P03 3.21 Zea mays 0 699 67 79 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BetaGal_dom4_5(2) GHD(1) Glyco_hydro_35(1) Glyco_hydro_42(1)
TargetP:	Secreted (Class 1 C0.004; M0.044; S0.979; _0.042)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	727 aa (-cTP 704)
Molecular Weight	82.01 kDA(-cTP )
PI	8.62(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1202	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1404	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
2399	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1WTSTREP
2400	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

18538804(apoplast)
19888209(leaves)
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data