PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G52770.1   binding protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G60890.1 11Arabidopsis thaliana2E-065052600 (0)C
AT3G60890.3 11Arabidopsis thaliana2E-065052600 (0)C
AT3G60890.2 11Arabidopsis thaliana3E-065052600 (0)C
Os04g33560.1 7Oryza sativa3E-184477930 (0)_
Os02g32850.1 7Oryza sativa1E-144465860 (0)_
Os12g05560.1 7Oryza sativa5E-124067870 (0)C
Zm00001eb242710_P001 agpv5Zea mays1E-174673890 (0)M
v1_GRMZM2G038497_P01 4a53Zea mays1E-174673890 (0)M
GRMZM2G038497_P01 3.21Zea mays1E-174673890 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Holin_BhlA(1)
TargetP: Cytoplasm (Class 4 C0.226; M0.170; S0.097; _0.612)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 67 aa (-cTP 53)
Molecular Weight 7.75 kDA(-cTP )
PI 9.67(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help