PPDB

PPDB	The Plant Proteome Database

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AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

Mapman: 27.4 RNA.RNA binding

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G52660.3 11 Arabidopsis thaliana 0 471 100 100 0 (0) _
AT3G52660.2 11 Arabidopsis thaliana 0 471 100 100 0 (0) _
AT4G00830.6 11 Arabidopsis thaliana 1E-145 449 46 69 0 (0) _
Os12g04180.2 7 Oryza sativa 2E-132 373 52 72 0 (0) _
Os12g04180.1 7 Oryza sativa 2E-132 373 52 72 0 (0) _
Os12g04180.3 7 Oryza sativa 2E-132 373 52 72 0 (0) _
Zm00001eb196360_P002 agpv5 Zea mays 1E-127 391 51 68 0 (0) _
v1_GRMZM2G075942_P01 4a53 Zea mays 2E-127 391 51 68 9 (9) _
Zm00001eb196360_P003 agpv5 Zea mays 2E-127 391 51 68 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Limkain-b1(2) PHM7_cyt(4) PTPlike_phytase(1) RRM_1(3) RRM_5(2) RRM_7(3) RRM_occl
TargetP:	Cytoplasm (Class 2 C0.087; M0.220; S0.110; _0.821)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	471 aa (-cTP 466)
Molecular Weight	52.08 kDA(-cTP )
PI	5.02(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20813957(SUMO proteome)

Comparative Proteomics Data