PPDB

The Plant Proteome Database

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AT3G52630.1   Nucleic acid-binding%2C OB-fold-like protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G52630.2 11Arabidopsis thaliana7E-761071001004 (3)_
AT4G18590.1 11Arabidopsis thaliana4E-6110781905 (3)_
Os01g14980.2 7Oryza sativa6E-3710752744 (4)_
Os01g14980.1 7Oryza sativa6E-3710752744 (4)_
GRMZM2G154896_P01 3.21Zea mays5E-3510752738 (7)C
v1_GRMZM2G154896_P01 4a53Zea mays5E-3510752734 (4)C
Zm00001eb333640_P002 agpv5Zea mays5E-3510752730 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Rep_fac-A_3(1)
TargetP: Cytoplasm (Class 5 C0.237; M0.194; S0.073; _0.282)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 107 aa (-cTP 57)
Molecular Weight 11.65 kDA(-cTP )
PI 5.24(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1596Detail        [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


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