PPDB

 The Plant Proteome Database

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AT3G52320.1   F-box and associated interaction domains-containing protein
Lab Annot. F-box domain protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G52330.1 11Arabidopsis thaliana1E-7139039500 (0)_
AT2G40910.1 11Arabidopsis thaliana3E-6036735530 (0)_
AT2G40910.2 11Arabidopsis thaliana3E-6036735530 (0)M
Os12g06740.1 7Oryza sativa7E-1826429450 (0)M
Os12g06740.2 7Oryza sativa8E-1826429450 (0)M
Os09g27660.3 7Oryza sativa3E-1733527440 (0)M
Zm00001eb387810_P003 agpv5Zea mays9E-1433123430 (0)C
v1_GRMZM2G442489_P02 4a53Zea mays9E-1433123430 (0)C
v1_GRMZM2G442489_P01 4a53Zea mays9E-1433123430 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: F-box(1) F-box-like(1) FBA_1(1) FBA_3(1)
TargetP: Cytoplasm (Class 1 C0.053; M0.047; S0.015; _0.904)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 390 aa (-cTP 298)
Molecular Weight 45.21 kDA(-cTP )
PI 9.64(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1481Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help