PPDB

The Plant Proteome Database

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AT3G52270.1   Transcription initiation factor IIF%2C beta subunit

Lab Annot.
Mapman: 27.3.50 RNA.regulation of transcription.General Transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G52270.2 11Arabidopsis thaliana2E-119164991000 (0)_
AT1G75510.1 11Arabidopsis thaliana1E-8225150684 (0)_
Os05g43450.1 7Oryza sativa1E-9225253730 (0)_
Os01g56550.2 7Oryza sativa6E-9026750690 (0)_
Os01g56550.1 7Oryza sativa9E-9026850690 (0)_
GRMZM2G049091_P01 3.21Zea mays5E-9126053713 (3)_
Zm00001eb292420_P001 agpv5Zea mays5E-9126053710 (0)_
v1_GRMZM2G049091_P01 4a53Zea mays5E-9126053712 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: TFIIF_beta(2)
TargetP: Cytoplasm (Class 2 C0.169; M0.091; S0.063; _0.884)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 269 aa (-cTP 259)
Molecular Weight 31.39 kDA(-cTP )
PI 7.67(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17272265(ubiquinated proteins (suspension cells))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help